Click [HERE] more information about XML format, and [HERE] for our GAME XML DTD. Click [HERE] for more information about GFF format.
Release 3.0 (August 2002)
BDGP Resources
Download Drosophila Genomic Sequence Annotations in XML or GFF format
Release 3.0 GFF files by chromosome arm |
Arm |
X |
2L |
2R |
3L |
3R |
4 |
unknown (U) |
Release 3.0 XML files by chromosome arm |
Arm |
X |
2L |
2R |
3L |
3R |
4 |
unknown (U) |
Release 2 (October 2000) index of chromosome arm coordinates for each accession:
ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2/gff/SEGMENTS.RELEASE2.gff Release 2 (October 2000) gene index:
ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2/gff/all_genes_by_arm.RELEASE2.gff Release 2 GFF files by chromosome arm
Release 2 GFF files by chromosome arm | |||
Arm | Compressed tar file | gzipped tar file | |
---|---|---|---|
X | [RELEASE2gff.X.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.X.tar.Z) | [RELEASE2gff.X.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.X.tar.gz) | |
2L | [RELEASE2gff.2L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.2L.tar.Z) | [RELEASE2gff.2L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.2L.tar.gz) | |
2R | [RELEASE2gff.2R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.2R.tar.Z) | [RELEASE2gff.2R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.2R.tar.gz) | |
3L | [RELEASE2gff.3L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.3L.tar.Z) | [RELEASE2gff.3L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.3L.tar.gz) | |
3R | [RELEASE2gff.3R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.3R.tar.Z) | [RELEASE2gff.3R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.3R.tar.gz) | |
4 | [RELEASE2gff.4.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.4.tar.Z) | [RELEASE2gff.4.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.4.tar.gz) | |
unknown (U) | [RELEASE2gff.U.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.U.tar.Z) | [RELEASE2gff.U.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2gff.U.tar.gz) | |
Release 2 XML files by chromosome arm | |||
Arm | Compressed tar file | gzipped tar file | |
X | [RELEASE2xml.X.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.X.tar.Z) | [RELEASE2xml.X.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.X.tar.gz) | |
2L | [RELEASE2xml.2L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.2L.tar.Z) | [RELEASE2xml.2L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.2L.tar.gz) | |
2R | [RELEASE2xml.2R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.2R.tar.Z) | [RELEASE2xml.2R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.2R.tar.gz) | |
3L | [RELEASE2xml.3L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.3L.tar.Z) | [RELEASE2xml.3L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.3L.tar.gz) | |
3R | [RELEASE2xml.3R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.3R.tar.Z) | [RELEASE2xml.3R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.3R.tar.gz) | |
4 | [RELEASE2xml.4.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.4.tar.Z) | [RELEASE2xml.4.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.4.tar.gz) | |
unknown (U) | [RELEASE2xml.U.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.U.tar.Z) | [RELEASE2xml.U.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE2xml.U.tar.gz) |
Release 1 (March 2000) index of chromosome arm coordinates for each accession:
ftp://ftp.fruitfly.org/pub/genomic/gadfly/RELEASE1/gff/SEGMENTS.RELEASE1.gff Release 1 (March 2000) gene index:
ftp://ftp.fruitfly.org/pub/genomic/gadfly/RELEASE1/gff/all_genes_by_arm.RELEASE1.gff Release 1 GFF files by chromosome arm
Release 1 GFF files by chromosome arm | |||
Arm | Compressed tar file | gzipped tar file | |
---|---|---|---|
X | [RELEASE1gff.X.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.X.tar.Z) | [RELEASE1gff.X.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.X.tar.gz) | |
2L | [RELEASE1gff.2L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.2L.tar.Z) | [RELEASE1gff.2L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.2L.tar.gz) | |
2R | [RELEASE1gff.2R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.2R.tar.Z) | [RELEASE1gff.2R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.2R.tar.gz) | |
3L | [RELEASE1gff.3L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.3L.tar.Z) | [RELEASE1gff.3L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.3L.tar.gz) | |
3R | [RELEASE1gff.3R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.3R.tar.Z) | [RELEASE1gff.3R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.3R.tar.gz) | |
4 | [RELEASE1gff.4.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.4.tar.Z) | [RELEASE1gff.4.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1gff.4.tar.gz) | |
Release 1 XML files by chromosome arm | |||
Arm | Compressed tar file | gzipped tar file | |
X | [RELEASE1xml.X.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.X.tar.Z) | [RELEASE1xml.X.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.X.tar.gz) | |
2L | [RELEASE1xml.2L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.2L.tar.Z) | [RELEASE1xml.2L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.2L.tar.gz) | |
2R | [RELEASE1xml.2R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.2R.tar.Z) | [RELEASE1xml.2R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.2R.tar.gz) | |
3L | [RELEASE1xml.3L.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.3L.tar.Z) | [RELEASE1xml.3L.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.3L.tar.gz) | |
3R | [RELEASE1xml.3R.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.3R.tar.Z) | [RELEASE1xml.3R.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.3R.tar.gz) | |
4 | [RELEASE1xml.4.tar.Z](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.4.tar.Z) | [RELEASE1xml.4.tar.gz](ftp://sos.lbl.gov/pub/genomic/gadfly/RELEASE1xml.4.tar.gz) |